Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834235.1_cds_XP_016505527.1_18858
CDS Infomation

[gene=LOC107823403] [db_xref=GeneID:107823403] [protein=exoglucanase/xylanase-like isoform X3] [protein_id=XP_016505527.1] [location=join(204970..204981,205247..205403,205538..205707,205831..205932,206016..206162,206313..206948,207222..207557)] [gbkey=CDS]
Sequence

ATGTGCCTAAGTTGCAAACTTTACCCAGAGAAGCCACTCTATGGCGGCGGAATTTTAAAG
GATAAGTTTCCGGAGTTTCAGGGGTTTACGGTAGCGGATGGAAAGAATGTCCATTTACCT
GTTTTCAGATTGCAAGATCTCACCCCTGGCACCATTTATTCTTTTTCCACTTGGATTAAG
ATAAAAAATGCAGATTCTTCTCTCATAACAGCAAGCGTAGGTGACAAAGATTCTGAAGAA
CTATGTGTTGGCACTGTAGATGCTAAGCCTGGATGCTGGTCCTTCCTCAAGGGTGGTTTT
GTAGCTTCTAAACTTAATTTATCTTCCATTTATTTAAAGAATTCAGATCAAGAAGCTTTG
GAAATAGAGATTGCTAGTGCTTCATTGCAGCCTTTTACTGAGGAACAATGGATCTTAAAT
CAACAGACAAAAATTAACATGGCAAGGAAGCGCGCTGTTACTATTCACGTCTCAAATAAA
CAAGGAGTTAGACTTGAAGGTGCAATACTAACAATAGAACAAGTTTCCAAAGATTTCCTC
CTTGGATCTGCTATTGCATATACCTTTATTGGTAATACCCCCTATCAGAACTGGTTTCTT
GAGCGATTCAATGCTGCAGTTTTTGAAGATGAAATCAAGTGGTACACCACAGAGCCTAAA
CGCGGTCAACTTAACTATACCTTAGCAGACCAGTTGCTGGAATTTGTTCGAAGAAACCAG
ATCACTGTCAGAGGTCACAATATTTTCTGGGAGGACCCAAAATATACACCAGGTTGGGTT
CAAAATCTTACAGATTCTGAGCTGAAATCAGCTGTTAACTCCAGGATACAGAGTCTTATG
AGTAAATACAAAGATGAATTTGTTCACTGGGATGTTAACAATGAACTGCTTCACTTTGAT
TTTTATGAGCAAAGGCTGGGACCAAATGCCACACTAGAATTTTACAGGACAGTTCACCAA
CAAGACCCTTTGGCAACCTTGTTCCTCAATGAATTCAATGTGGTAGAAAATTGTGATTCT
AAGTCCACTGTAGACAAGTATATTTCAAAGATCAGGGAGCTCAAAGAAGATGGCATGTCA
ATGGATGGAATTGGACTTGAGGGTCATTTTGGAGTCCCCAATCGGCCTCGAATAAGAGCT
ACTTTAGATAAATTAGCAACATTGGGGCTTCCCATTTGGCTCACAGAAGTTGATATCAGT
GAAACATTTAGCAAGGAAACACAGGCTATTTACTTAGAACAAGTATTGAGGGAGGCCTTC
TCACATCCGGCTGTGGATGGGATAATGCTGTGGAGTGCCATAAGGAGAAACAAATGTTAC
AGAATGTGCCTTACAGATCCAGACTTAAATAACCTACCAACTGGTAATGTAGTGGACAAG
CTTCTGAAGGAGTGGGAAACTGGGGTTCTGAAGGGCCAAACAGTTGCACGTGGTTCTTAC
AGCTTCTATGGCTTCCTTGGTGATTACAAAGTTACTGTTAGTTATGGAGGTCAAGTTGTG
GATGCAGCATTCTCACTTAGCCGCAGTGAAGAGACTAAGCATTTTAGCATTCAGCTGTGA

Peptide Sequence

PEP ID

XP_016505527.1
PEP Infomation

PREDICTED: exoglucanase/xylanase-like isoform X3 [Nicotiana tabacum]
Sequence

MCLSCKLYPEKPLYGGGILKDKFPEFQGFTVADGKNVHLPVFRLQDLTPGTIYSFSTWIK
IKNADSSLITASVGDKDSEELCVGTVDAKPGCWSFLKGGFVASKLNLSSIYLKNSDQEAL
EIEIASASLQPFTEEQWILNQQTKINMARKRAVTIHVSNKQGVRLEGAILTIEQVSKDFL
LGSAIAYTFIGNTPYQNWFLERFNAAVFEDEIKWYTTEPKRGQLNYTLADQLLEFVRRNQ
ITVRGHNIFWEDPKYTPGWVQNLTDSELKSAVNSRIQSLMSKYKDEFVHWDVNNELLHFD
FYEQRLGPNATLEFYRTVHQQDPLATLFLNEFNVVENCDSKSTVDKYISKIRELKEDGMS
MDGIGLEGHFGVPNRPRIRATLDKLATLGLPIWLTEVDISETFSKETQAIYLEQVLREAF
SHPAVDGIMLWSAIRRNKCYRMCLTDPDLNNLPTGNVVDKLLKEWETGVLKGQTVARGSY
SFYGFLGDYKVTVSYGGQVVDAAFSLSRSEETKHFSIQL

Transcript Sequence

Gene sequence data has not been registered.